Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927639.1_cds_XP_016475403.1_67340
CDS Infomation

[gene=LOC107797063] [db_xref=GeneID:107797063] [protein=IAA-amino acid hydrolase ILR1-like 6] [protein_id=XP_016475403.1] [location=complement(join(8375..8743,9387..9515,9986..10300,13807..13932,14636..15151))] [gbkey=CDS]
Sequence

ATGGATATCTTAGTGAAGTTTTTTACAATATCTTCTAAAAAAGCAATCTTTTTTGCCATA
TTTCTTGGTTTCATGATAGCTAATCCATTAAAGGGGGCAAAAACCCCTACTGCCTCTTCC
TCTGATCAACATGATTTCACATACTTCAAATCCACTACTTTATTAAAAAATCCCATTAAT
ATGGTCCTTCAAAATCAAACAAGAACACCAAAACTCAAACTTTTTACCTCCTCGGACTGC
TCAATCTGGACAAAAGAATGTTCAGATGAGATTCTGAAAATTGCCCATAAGAAAGAGCAT
GTGAAATGGATAAAATCTGTGAGGAGAAAAATACATGAATACCCTGAGCTTGCTTTTGAA
GAATATGAAACTAGTAAACTTGTTCGTCAAGAACTTGAGAAAATGGAGATTCCTTTTCAG
TTTCCTTTAGCCACTACCGGAATTCGAGCCATGATCGGCTCCGGCCAGCCGCCCTTTGTT
GCTCTCAGAGCTGATATGGATGCCCTTCCAATTCAGGAAGCTGTTGAATGGGAGCATAAG
AGCAAAATTGCAGGCAAAATGCACGCTTGTGGTCATGACGCTCATGTGGCTATGCTCATA
GGTGCAGCCAAAATTTTAAAGGCTCGTGAGAAGAACTTAAAGGGGACAGTGATTCTAATA
TTTCAGCCAGCAGAGGAAAAAGGGAATGGAGCAAAAAGGATGATAAAAAATGGAGCTTTA
GAAAATGTAGAGGCTATATTTGCTGTTCATGTTTCACATCAGCATCCAACTGGTGTAATT
GGTTCAAGACCGGGTCCTCTTCTTGCTGGATGTGGCTTTTTTAGAGCTGTCATTAGTGGT
AAGACAGGCCAAGCAAGCAATCCCCACCACTCTATTGATCCTGTACTTGCTGCCTCTGCT
GCTGTTATCAGCTTGCAAAGTATTGTTTCTCGTGAGTCCAATCCCTTGGATTCTCAGGTG
GTCTCGGTGACATCGTTCAATGCCGGAGATAAGCTTGATGTGATACCAGATGCAGTTACT
CTCAGTGGAACTTTCAGGGCTTTCTCCAGCACCAACTTTTATCAGCTTCTTAAAAGAATA
AGAGAGGTATTCGAAGAACAAGCTAGTGTGTTCAGATGCAGTGCAACAGTGGATTTTTTC
GAAGACAAGGACACAATCTATCCTCCGACTGTGAACGATGACAGAATGTACGAACACGTG
AAGAAGGTCGCCGGTGATTTGGTTGGTCCAGCGAACTTTAAGGTTGTTCCACCGATAATG
GGAGCCGAGGACTTCTCCTTCTATTCTGAAGTGATACCTGCAGCATTCTTCTATATAGGT
ATAAGGAATGAGACATTAGGATCATATCATACAGGACACTCCCCACATTTCATGATTGAT
GAAGATGTATTACCTATTGGTGCAGCAACTCATGCTGCAATTGCGGAAAGATACCTTTAT
GAGTATGGATCTTGA

Peptide Sequence

PEP ID

XP_016475403.1
PEP Infomation

PREDICTED: IAA-amino acid hydrolase ILR1-like 6 [Nicotiana tabacum]
Sequence

MDILVKFFTISSKKAIFFAIFLGFMIANPLKGAKTPTASSSDQHDFTYFKSTTLLKNPIN
MVLQNQTRTPKLKLFTSSDCSIWTKECSDEILKIAHKKEHVKWIKSVRRKIHEYPELAFE
EYETSKLVRQELEKMEIPFQFPLATTGIRAMIGSGQPPFVALRADMDALPIQEAVEWEHK
SKIAGKMHACGHDAHVAMLIGAAKILKAREKNLKGTVILIFQPAEEKGNGAKRMIKNGAL
ENVEAIFAVHVSHQHPTGVIGSRPGPLLAGCGFFRAVISGKTGQASNPHHSIDPVLAASA
AVISLQSIVSRESNPLDSQVVSVTSFNAGDKLDVIPDAVTLSGTFRAFSSTNFYQLLKRI
REVFEEQASVFRCSATVDFFEDKDTIYPPTVNDDRMYEHVKKVAGDLVGPANFKVVPPIM
GAEDFSFYSEVIPAAFFYIGIRNETLGSYHTGHSPHFMIDEDVLPIGAATHAAIAERYLY
EYGS

Transcript Sequence

Gene sequence data has not been registered.